CDS

Accession Number TCMCG057C21170
gbkey CDS
Protein Id XP_018478861.1
Location complement(join(42432721..42432837,42432946..42433043,42433130..42433256,42433352..42433401,42433503..42433626,42433803..42433883,42433967..42434082,42434155..42434250,42434318..42434561,42434639..42434661,42434744..42434838,42434911..42435227))
Gene LOC108849758
GeneID 108849758
Organism Raphanus sativus

Protein

Length 495aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018623359.1
Definition PREDICTED: spastin-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Belongs to the AAA ATPase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K13254        [VIEW IN KEGG]
EC 3.6.4.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0001578        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006998        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007018        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008088        [VIEW IN EMBL-EBI]
GO:0008089        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008568        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0010458        [VIEW IN EMBL-EBI]
GO:0010970        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019896        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030496        [VIEW IN EMBL-EBI]
GO:0030705        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031468        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0034214        [VIEW IN EMBL-EBI]
GO:0034643        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043014        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044770        [VIEW IN EMBL-EBI]
GO:0044772        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0047497        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048487        [VIEW IN EMBL-EBI]
GO:0051013        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051228        [VIEW IN EMBL-EBI]
GO:0051230        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051260        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051646        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051654        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072384        [VIEW IN EMBL-EBI]
GO:0090148        [VIEW IN EMBL-EBI]
GO:0098930        [VIEW IN EMBL-EBI]
GO:0099111        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTCCTCAGAGGCATAATCGAATCCTTCAGCTCAATCTTTACGGAAGAAACCAAACACGATCCCACCGGATCAACAACCTCTTCTGATTCCATGAGCAGCGTCGTCAATGGAAGAGGTAGTTCTTCGGTTACTAACGAACGAGTCGCGTATAAGCTCAAAGGATACTTCGATTTAGCGAAAGAGGAGATCGACAAAGGTGTTAGATCAGAAGAGTGGGGTTTGCACGACGACGCGCTTCTTCACTACAGAAACGCTCAGAGGATCATGAACGAAGCTACCTCTACGCCTTCTCCTTCGTACATCAGTTCCAGTAGTGAGAAAGAGAAGGTGAGATTGTATAGAGAGAAGATTTCTAAATGGCAGAGTCAAGTTTCTGGGAGATTGCAAGCTCTCAGTAAACGTACAGGTGTTGGAGTGTCTGAGAATAAGAGAACTGTAAACTCTCCTTCTTCAGCTTCTGCTCCCTCTATTGCGTCAAACAGAAGAGTCTCATTGCAAAGGAGGACTTCACTCCCCAGAGGTGGTACTGGAACGGCGAGGAGCCCTAGAGATGCTGCTACCGCAAACCCAAAACCTGTGAAAGAATCTGGAAGTGGATACGATGATAAGCTAGTAGAGATGATAAACACAACGATAGTTGATAGAAGTCCATCTGTGAAGTGGGATGATGTCGCTGGACTTGATGGAGCTAAACAAGCTTTAATGGAGATGGTTATTTTACCAGCAAAACGAAGAGATTTATTCACTGGTCTACGGAGACCAGCTAGAGGTTTGCTTCTCTTTGGTCCACCTGGCAATGGAAAAACAATGCTTGCCAAGGCGGTGGCTTCTGAGTCTCAGGCAACGTTCTTCAATGTCTCAGCATCTTCTTTGACATCAAAATGGGTGGGTGAGGCTGAAAAGCTAGTTAAAACCTTGTTCCAAGTTGCAATATCCAGACAACCTTCTGTAATTTTTATGGATGAAATAGATAGTATAATGTCTACAAGGTCGGTCAGTGAGAATGAAGCAAGCAGAAGGTTGAAATCAGAGTTCCTTATCCAGTTCGATGGTGTAACTTCTAATCCTGATGATTTGGTGATTGTCATTGGAGCTACTAACAAGCCACAGGAGTTGGATGACGCGGTGCTTAGAAGACTGGTGAAGAGAATATATGTACCGCTACCGGATTCAAACGTGAGAAAACTACTTTTCAAAACTAAACTCAAGTGCCAACCTCACTCTTTATCCGGTGGCGACATTGATAAAATCGTCAGTGAAACCGAAGGATACTCAGGAAGCGATCTACAAGCATTGTGTGAAGAAGCTGCAATGATGCCAATCAGAGAACTCGGTGCAGATATTCTCACCATCCAAGCAAATAAAGTGAGACCGCTAAGGTATGATGATTTTAGGAAGTCAATGGCAGTGATCAGACCAAGCTTGAGTAAAAGCAAATGGGAAGAGCTTGAACGTTGGAACTCTGAGTTTGGCTCTAATTGA
Protein:  
MSFLRGIIESFSSIFTEETKHDPTGSTTSSDSMSSVVNGRGSSSVTNERVAYKLKGYFDLAKEEIDKGVRSEEWGLHDDALLHYRNAQRIMNEATSTPSPSYISSSSEKEKVRLYREKISKWQSQVSGRLQALSKRTGVGVSENKRTVNSPSSASAPSIASNRRVSLQRRTSLPRGGTGTARSPRDAATANPKPVKESGSGYDDKLVEMINTTIVDRSPSVKWDDVAGLDGAKQALMEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSVSENEASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSGGDIDKIVSETEGYSGSDLQALCEEAAMMPIRELGADILTIQANKVRPLRYDDFRKSMAVIRPSLSKSKWEELERWNSEFGSN